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| Name | Last modified | Size | Description |
|---|---|---|---|---|
| Parent Directory | - | ||
| AMPLICONprocessing.pdf | 2022-01-19 11:43 | 231K | |
| AMPLImock | 2022-01-19 11:43 | 33K | |
| AMPLImock.pdf | 2022-01-19 11:44 | 836K | |
| BIOSQL_tutorial.pdf | 2022-01-19 11:43 | 84K | |
| BWA_tutorial.pdf | 2022-01-19 11:43 | 104K | |
| CLUSThack_v0.2.tar.gz | 2022-01-19 11:43 | 30K | |
| CONCOCT.html | 2022-01-19 11:43 | 31K | |
| CONCOCT/ | 2022-01-19 11:43 | - | |
| ENV_pitlatrine_BP.jpg | 2022-01-19 11:43 | 411K | |
| GENERATEtable.sh | 2022-01-19 11:43 | 354 | |
| GraphicalLasso.tar.gz | 2022-01-19 11:44 | 34K | |
| HEAPcloud.pdf | 2022-01-19 11:43 | 488K | |
| HEAPcloud_v0.1.zip | 2022-01-19 11:43 | 105K | |
| HEAPcloud_v0.1/ | 2022-01-19 11:43 | - | |
| HEATcloud_v0.1/ | 2022-01-19 11:43 | - | |
| Illumina_workflow.html | 2022-01-19 11:43 | 63K | |
| Illumina_workflow/ | 2022-01-19 11:44 | - | |
| KO2MODULEclusters2.py | 2022-01-19 11:43 | 7.2K | |
| METAmock | 2022-01-19 11:44 | 12K | |
| METAmock.pdf | 2022-01-19 11:43 | 59K | |
| MetaModule.pdf | 2022-01-19 11:44 | 68K | |
| Metagenomics_tutoria..> | 2022-01-19 11:43 | 69K | |
| Metagenomics_tutorial/ | 2022-01-19 11:44 | - | |
| Metaproteomics.html | 2022-01-19 11:43 | 19K | |
| Metaproteomics/ | 2022-01-19 11:44 | - | |
| PHYLObar_v0.1/ | 2022-01-19 11:44 | - | |
| PHYLOmap.pdf | 2022-01-19 11:43 | 897K | |
| PHYLOmap.py | 2022-01-19 11:44 | 18K | |
| PHYLOmap_example_dat..> | 2022-01-19 11:44 | 1.1M | |
| PROKKA_CDD.py | 2022-01-19 11:43 | 7.1K | |
| PROKKA_RPSBLAST.sh | 2022-01-19 11:43 | 5.3K | |
| Path2Newick.java | 2022-01-19 11:43 | 2.1K | |
| Projects/ | 2022-01-19 11:43 | - | |
| Python_Lab.pdf | 2022-01-19 11:43 | 384K | |
| QC.html | 2022-01-19 11:43 | 17K | |
| QC/ | 2022-01-19 11:43 | - | |
| SEQenv.pdf | 2022-01-19 11:44 | 1.3M | |
| UPARSE.pdf | 2022-01-19 11:43 | 83K | |
| annotation.html | 2022-01-19 11:43 | 51K | |
| annotation/ | 2022-01-19 11:43 | - | |
| assembly_tutorial.pdf | 2022-01-19 11:43 | 481K | |
| average_GC_hist_FAST..> | 2022-01-19 11:44 | 300 | |
| average_GC_hist_FAST..> | 2022-01-19 11:43 | 250 | |
| average_quality_hist..> | 2022-01-19 11:43 | 279 | |
| biopython.txt | 2022-01-19 11:44 | 179K | |
| blast_concat_name_ta..> | 2022-01-19 11:43 | 4.1K | |
| blast_concat_name_ta..> | 2022-01-19 11:43 | 2.0K | |
| blastdbcmd_16SrRNA.pdf | 2022-01-19 11:44 | 98K | |
| blastn.sh | 2022-01-19 11:44 | 1.3K | |
| blastn_parallel.sh | 2022-01-19 11:43 | 3.2K | |
| clust_validity.R | 2022-01-19 11:44 | 16K | |
| clust_validity.pdf | 2022-01-19 11:44 | 2.8M | |
| clust_validity_datas..> | 2022-01-19 11:44 | 28K | |
| clust_validity_usage..> | 2022-01-19 11:43 | 1.5M | |
| collateGCMSResults.pl | 2022-01-19 11:44 | 5.7K | |
| collateResults.pl | 2022-01-19 11:43 | 4.1K | |
| collate_CSV.R | 2022-01-19 11:44 | 3.4K | |
| compseq.sh | 2022-01-19 11:43 | 494 | |
| convIDs.pl | 2022-01-19 11:43 | 3.4K | |
| cpgreport.sh | 2022-01-19 11:44 | 502 | |
| dan.sh | 2022-01-19 11:43 | 480 | |
| data/ | 2022-01-19 11:43 | - | |
| db.sqlite.gz | 2022-01-19 11:43 | 174M | |
| density.sh | 2022-01-19 11:44 | 481 | |
| duplication_hist_FAS..> | 2022-01-19 11:43 | 362 | |
| duplication_hist_FAS..> | 2022-01-19 11:43 | 309 | |
| ecological.html | 2022-01-19 11:43 | 553K | |
| ecological/ | 2022-01-19 11:43 | - | |
| emboss.html | 2022-01-19 11:43 | 62K | |
| emboss/ | 2022-01-19 11:43 | - | |
| etandem.sh | 2022-01-19 11:43 | 465 | |
| extract_fasta_swissp..> | 2022-01-19 11:43 | 5.5K | |
| extract_scansite_mot..> | 2022-01-19 11:43 | 2.5K | |
| forward.fastq | 2022-01-19 11:43 | 5.4M | |
| freak.sh | 2022-01-19 11:43 | 460 | |
| fuzznuc.sh | 2022-01-19 11:44 | 484 | |
| fuzztran.sh | 2022-01-19 11:43 | 488 | |
| genbank_enzymes.py | 2022-01-19 11:43 | 7.5K | |
| getorf.sh | 2022-01-19 11:44 | 656 | |
| ggplot2/ | 2022-01-19 11:44 | - | |
| hclust.py | 2022-01-19 11:44 | 5.3K | |
| length_distribution_..> | 2022-01-19 11:43 | 204 | |
| length_distribution_..> | 2022-01-19 11:44 | 223 | |
| linkage_info.pdf | 2022-01-19 11:43 | 200K | |
| linux.html | 2022-01-19 11:44 | 70K | |
| linux/ | 2022-01-19 11:43 | - | |
| newcpgreport.sh | 2022-01-19 11:43 | 677 | |
| oneliners.html | 2022-01-19 11:44 | 170K | |
| oneliners/ | 2022-01-19 11:43 | - | |
| path_to_root_node.sql | 2022-01-19 11:43 | 1.1K | |
| perbase_ATcontent_FA..> | 2022-01-19 11:43 | 570 | |
| perbase_ATcontent_FA..> | 2022-01-19 11:43 | 507 | |
| perbase_GCcontent_FA..> | 2022-01-19 11:43 | 570 | |
| perbase_GCcontent_FA..> | 2022-01-19 11:43 | 506 | |
| perbase_Ncontent_FAS..> | 2022-01-19 11:43 | 567 | |
| perbase_Ncontent_FAS..> | 2022-01-19 11:43 | 507 | |
| perbase_quality_FAST..> | 2022-01-19 11:43 | 596 | |
| perbase_seqcontent_F..> | 2022-01-19 11:44 | 772 | |
| perbase_seqcontent_F..> | 2022-01-19 11:43 | 710 | |
| remove_colinear_terms.R | 2022-01-19 11:43 | 8.8K | |
| reverse.fastq | 2022-01-19 11:43 | 5.4M | |
| spatial_tutorial.pdf | 2022-01-19 11:44 | 657K | |
| subsample_pe_fasta.sh | 2022-01-19 11:43 | 485 | |
| subsample_pe_fastq.sh | 2022-01-19 11:44 | 334 | |
| subsample_se_fasta.sh | 2022-01-19 11:44 | 359 | |
| subsample_se_fastq.sh | 2022-01-19 11:43 | 288 | |
| subsampling_assembly..> | 2022-01-19 11:44 | 68K | |
| subsampling_reads.pdf | 2022-01-19 11:44 | 62K | |
| subsetFASTAFASTAQ.html | 2022-01-19 11:44 | 24K | |
| summarize_v0.2/ | 2022-01-19 11:43 | - | |
| taxo_CCA_adonis_plot.R | 2022-01-19 11:44 | 6.6K | |
| taxo_CCA_plot.R | 2022-01-19 11:43 | 5.6K | |
| taxo_NMDS_bioenv.R | 2022-01-19 11:43 | 20K | |
| taxo_NMDS_env_plot.R | 2022-01-19 11:43 | 5.6K | |
| taxo_NMDS_plot.R | 2022-01-19 11:43 | 5.4K | |
| taxo_bivariate_plot.R | 2022-01-19 11:43 | 5.2K | |
| taxo_dissimilarity_p..> | 2022-01-19 11:43 | 5.6K | |
| taxo_diversity_plot.R | 2022-01-19 11:43 | 5.6K | |
| taxo_hclus_plot.R | 2022-01-19 11:43 | 3.9K | |
| taxo_richness_plot.R | 2022-01-19 11:43 | 6.3K | |
| taxo_spatial_tempora..> | 2022-01-19 11:43 | 13K | |
| tcode.sh | 2022-01-19 11:43 | 496 | |
| test.fasta | 2022-01-19 11:44 | 53K | |
| test.pdf | 2022-01-19 11:43 | 78K | |
| top_kmer_FASTA.sh | 2022-01-19 11:43 | 117 | |
| top_kmer_FASTQ.sh | 2022-01-19 11:43 | 117 | |
| usearch_aln_transiti..> | 2022-01-19 11:43 | 8.4K | |