Basic Statistics
Measure | Value |
---|---|
Filename | M120_S2_L001_R1_001.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 421292 |
Filtered Sequences | 0 |
Sequence length | 35-301 |
%GC | 28 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGAGG | 65200 | 3.4007542 | 4.2310266 | 4 |
CCTCC | 62490 | 3.2364292 | 3.8956616 | 8 |
GGAGC | 60100 | 3.1318362 | 3.5353942 | 5 |
GCTCC | 60345 | 3.1282392 | 3.5020874 | 50-59 |
GGTGG | 57855 | 3.0075226 | 3.5268037 | 6 |
TGGAG | 142140 | 3.0058286 | 3.430805 | 4 |